Fig. 1

A pan-cancer spatial single-cell transcriptome atlas. a Schematic depicting the study design. The cancer types included in this pan-cancer study were displayed in the first image on the left, created by Figdraw. b The number of samples in the pan-cancer analysis of scRNA-seq and ST. c Pie chart showing the proportion of ST sections that have corresponding scRNA-seq data from the same patient compared to those without such corresponding scRNA-seq data. d The number of cells in the pan-cancer analysis of scRNA-seq and ST. e Uniform Manifold Approximation and Projection (UMAP) plots showing the major cell types in CRC. f Bubble heatmap showing the expression of marker genes for the major cell types in CRC. g Spatial cell charting of CRC using CellTrek